Publications
Knowledge generated at IrsiCaixa is shared with the scientific community through the publication of articles in high impact scientific journals.
Performance comparison of next generation sequencing analysis pipelines for HIV-1 drug resistance testing.
Evolution of the gut microbiome following acute HIV-1 infection.
Gut microbiome comparability of fresh-frozen versus stabilized-frozen samples from hospitalized patients using 16S rRNA gene and shotgun metagenomic sequencing.
Etiological Characterization of the Cutaneous Ulcer Syndrome in Papua New Guinea Using Shotgun Metagenomics.
Low nadir CD4+ T-cell counts predict gut dysbiosis in HIV-1 infection.
Exploring interactions between Blastocystis sp., Strongyloides spp. and the gut microbiomes of wild chimpanzees in Senegal.
HIV drug resistance testing - The quest for Point-of-Care.
Bioinformatic data processing pipelines in support of next-generation sequencing-based HIV drug resistance testing: the Winnipeg Consensus.
HIV drug resistance patterns in pregnant women using next generation sequence in Mozambique.
Clinically relevant thresholds for ultrasensitive HIV drug resistance testing: a multi-country nested case-control study.